Ensure that pruned Instances aren't treated as existing in syncback (#1179)

Closes #1178.

rojo-test/syncback-test-snapshots/end_to_end__rojo_test__syncback_util__ref_properties_pruned-stdout.snap

@@ -0,0 +1,7 @@
+---
+source: tests/rojo_test/syncback_util.rs
+expression: "String::from_utf8_lossy(&output.stdout)"
+---
+Writing src/Pointer1.model.json
+Writing src/Pointer2.model.json
+Writing src/Pointer3.model.json

rojo-test/syncback-test-snapshots/end_to_end__tests__syncback__ref_properties_pruned-src__Pointer1.model.json.snap

@@ -0,0 +1,7 @@
+---
+source: tests/tests/syncback.rs
+expression: src/Pointer1.model.json
+---
+{
+  "className": "ObjectValue"
+}

rojo-test/syncback-test-snapshots/end_to_end__tests__syncback__ref_properties_pruned-src__Pointer2.model.json.snap

@@ -0,0 +1,7 @@
+---
+source: tests/tests/syncback.rs
+expression: src/Pointer2.model.json
+---
+{
+  "className": "ObjectValue"
+}

rojo-test/syncback-test-snapshots/end_to_end__tests__syncback__ref_properties_pruned-src__Pointer3.model.json.snap

@@ -0,0 +1,7 @@
+---
+source: tests/tests/syncback.rs
+expression: src/Pointer3.model.json
+---
+{
+  "className": "ObjectValue"
+}

rojo-test/syncback-tests/ref_properties_pruned/input-project/default.project.json

@@ -0,0 +1,9 @@
+{
+  "name": "ref_properties_pruned",
+  "tree": {
+    "$className": "DataModel",
+    "ServerScriptService": {
+      "$path": "src"
+    }
+  }
+}